rs562273 chr5:83608326 A>G
- Sequence
ttctctaagaagttgtcatgcagg[A/G]gctgagccactagatgtcacaaat
- ASB in cell types
- A549 (lung carcinoma) erythroid progenitors LNCaP C4-2B (prostate carcinoma) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.27 | 0.99 | 1.46 | n/a | No Hit |
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