rs56383840 chr1:21862332 C>T
- Sequence
gcacagtgactcatgcctgtaatc[C/T]cagcactctgggaggccgaggcgg
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- HDAC2_HUMAN KDM1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HDAC2_HUMAN | -1.69 | 1.76 | 1.33 | n/a | n/a | |||
| KDM1A_HUMAN | -0.98 | 1.35 | 1.33 | n/a | n/a |
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