rs564117 chr19:35228035 C>T
- Sequence
cgagcctgaagttgtcaaaaatga[C/T]gtaatccacccttaactgtgtgtt
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- ATF2_HUMAN ATF7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | 2.66 | n/a | 1.33 | -0.05 | Weak Concordant | |||
| ATF7_HUMAN | 2.52 | -2.82 | 1.33 | n/a | n/a |
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Motif analysis
