rs565973 chr18:65415362 T>G
- Sequence
cagtgtgagcttgtacttttgttt[T/G]ccaggttggccctgaggcattata
- ASB in cell types
- MDA-MB-453 (breast adenocarcinoma) ZR-75-1 (invasive ductal carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -1.42 | 1.92 | 1.39 | n/a | No Hit | |||
| ANDR_HUMAN | -0.10 | 1.29 | 1.75 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP arthritis including non-rheumatoid, infant head circumference, multiple sclerosis (females), tetrology of fallot, triglycerides