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rs566130 chr19:39433489 T>C

Sequence
cttgacttgatccccacacaccca[T/C]ctacctcatgggaaggacccatgc
ASB in cell types
A549 (lung carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
A549 (lung carcinoma) -0.38 0.73 1.003.8·10-3 1.92
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose aortic valve calcium ldl cholesterol change with statins tetrology of fallot total cholesterol change with statins
GTEx eQTL Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Brain_Anterior_cingulate_cortex_BA24 Brain_Caudate_basal_ganglia Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Nucleus_accumbens_basal_ganglia Cells_Cultured_fibroblasts Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Spleen Stomach Testis Thyroid Whole_Blood

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