rs568487 chr13:26186427 C>G
- Sequence
ttgggccgcagagcaagagcggga[C/G]gcgccggggggcgtctgcgtggca
- ASB in cell types
- HepG2 (hepatoblastoma) GM12878 (female B-cells)
- ASB for transcription factors
- RING2_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RING2_HUMAN | -2.17 | 1.96 | 1.33 | n/a | n/a | |||
| CTCF_HUMAN | 0.63 | 0.69 | 1.24 | 1.51 | Weak Discordant |
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Motif analysis
