rs56848735 chr12:6554222 C>T
- Sequence
cctcacccagtgctgaatctccgc[C/T]acactgggctgcataggtagttcc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) erythroid progenitors MM1.S (plasma cell myeloma) uterus
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| MCF7 (Invasive ductal breast carcinoma) | 0.49 | 0.82 | 1.84 | |||
| erythroid progenitors | 2.42 | n/a | 2.50 | |||
| MM1.S (plasma cell myeloma) | 1.14 | -0.47 | 1.17 | |||
| uterus | -0.36 | 1.58 | 1.00 | |||
| breast epithelial cells | -1.80 | 1.84 | 1.00 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Breast_Mammary_Tissue, Esophagus_Mucosa, Lung, Thyroid, Whole_Blood