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rs568614 chr1:234326342 A>G

Sequence
atggagagttattgtttagtgggc[A/G]tatagtttcagtttgcaaagatga
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF1_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN n/a 1.91 1.006.5·10-3 1.33 n/a No Hit
IKZF2_HUMAN -1.81 1.98 1.000.01 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol total cholesterol
GTEx eQTL Adipose_Visceral_Omentum Esophagus_Mucosa

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