rs56929265 chr13:112942946 C>T
- Sequence
cagcaccctcgtgagctgctgttc[C/T]atttttccttctgtatttaggatt
- ASB in cell types
- HEK293 (embryonic kidney) epidermal keratinocytes HeLa Kyoto (cervical adenocarcinoma)
- ASB for transcription factors
- ZN189_HUMAN ZN341_HUMAN CTCF_HUMAN ZBT17_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN189_HUMAN | 3.45 | n/a | 2.00 | n/a | n/a | |||
| ZN341_HUMAN | 2.69 | n/a | 2.00 | -2.99 | Concordant | |||
| CTCF_HUMAN | 1.41 | 0.64 | 1.56 | n/a | No Hit | |||
| ZBT17_HUMAN | 2.31 | -3.14 | 2.00 | n/a | No Hit |
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Motif analysis
