rs569523 chr5:78728543 T>C
- Sequence
gctttagcctgcgtactctcaggg[T/C]cttatctgctgtcagccaggtagg
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | n/a | 1.85 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP alzheimers disease, fasting blood glucose, hiv-1 control (viral load at set point), refractive error