ADASTRA v1.6.10
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rs569827
chr1:66726004
C
>
T
Sequence
attgtggcagcccagccagttgta[C/T]tacatgagtcagatgacaggaaag
ASB in cell types
HEK293 (embryonic kidney)
HEK293T (embryonic kidney)
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View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
0.59
-0.21
2.0·10
-5
0.96
1.98
HEK293T (embryonic kidney)
-0.19
0.83
1.00
2.1·10
-3
1.49
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
ldl cholesterol
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Brain_Caudate_basal_ganglia
,
Brain_Cortex
,
Brain_Putamen_basal_ganglia
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Muscle_Skeletal
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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