rs570186 chr11:94632740 G>A
- Sequence
aggttttaaataagactaagcatg[G/A]tttattccaggaatgcacagattt
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.90 | 0.21 | 1.74 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP birth weight, college completion, diastolic blood pressure (dbp), fasting blood glucose, total cholesterol, years of education
GTEx eQTL Adipose_Subcutaneous, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Lung, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid