rs570204 chr11:221195 T>C
- Sequence
tgcagtggcatgatcatagttcac[T/C]ataacctcaaattcctgggctcaa
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF1_HUMAN ARI1B_HUMAN TIF1A_HUMAN MTA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | n/a | 3.35 | 2.00 | n/a | No Hit | |||
| ARI1B_HUMAN | n/a | 3.03 | 2.00 | n/a | n/a | |||
| TIF1A_HUMAN | -2.26 | 2.33 | 2.00 | n/a | n/a | |||
| MTA3_HUMAN | n/a | 2.40 | 2.00 | n/a | n/a | |||
| TAL1_HUMAN | -1.61 | 1.83 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Brain_Caudate_basal_ganglia, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Atrial_Appendage, Testis