rs571396462 chr9:39036696 A>G
- Sequence
gatggtctcgatctcctgaccttc[A/G]tgatccacctgcctcggcctccca
- ASB in cell types
- HepG2 (hepatoblastoma) MCF7 (Invasive ductal breast carcinoma) LNCaP (prostate carcinoma) HEK293T (embryonic kidney)
- ASB for transcription factors
- CTCF_HUMAN TBX3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.60 | n/a | 1.00 | n/a | No Hit | |||
| TBX3_HUMAN | 2.20 | n/a | 1.33 | n/a | No Hit |
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