ADASTRA v1.6.10
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rs57247303
chr1:147172842
C
>
T
Sequence
tccctgggctccggtgctcggtgc[C/T]gggaggagcggcacggctttctac
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
MM1.S (plasma cell myeloma)
T47D (invasive ductal carcinoma)
ASB for transcription factors
ZN574_HUMAN
CTCF_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN574_HUMAN
0.82
n/a
5.9·10
-3
1.00
2.00
n/a
n/a
CTCF_HUMAN
0.56
1.05
0.67
0.02
1.96
n/a
No Hit
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5
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Brain_Cerebellum
,
Cells_Cultured_fibroblasts
,
Testis
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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log2(Alt/Ref motif p-value)