ADASTRA v1.6.10
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rs573322
chr11:58928882
G
>
A
Sequence
tatccttggtcaaactacccccaa[G/A]agggccatctgtctcaaaggttac
ASB in cell types
LNCaP (prostate carcinoma)
breast tumor tissue
ASB for transcription factors
FOXA1_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN
1.12
-0.09
8.6·10
-5
1.00
1.54
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
GTEx eQTL
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Pancreas
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)