rs57423896 chr2:237590676 T>C
- Sequence
agcagcagcctcggaccagagcaa[T/C]gcccactggaccccagcgccaagg
- ASB for transcription factors
- HNF4A_HUMAN ERR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HNF4A_HUMAN | 1.46 | -1.74 | 1.33 | n/a | No Hit | |||
| ERR1_HUMAN | -0.19 | 1.09 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Brain_Anterior_cingulate_cortex_BA24, Brain_Cortex, Brain_Frontal_Cortex_BA9, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood