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rs575123 chr11:60927829 C>A

Sequence
ccggctccatgccacacaccctgc[C/A]ggcactgctcaccaagcctgccgc
ASB in cell types
esophagus squamous epithelium
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.05 1.53 1.000.01 1.22 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP myopia
GTEx eQTL Adipose_Subcutaneous Adrenal_Gland Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Heart_Atrial_Appendage Lung Muscle_Skeletal Nerve_Tibial Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Thyroid Whole_Blood

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