rs575577 chr1:83999374 G>C
- Sequence
gaagacactgctcgagctttcccg[G/C]gccacacacaccccccccccgttt
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells)
- ASB for transcription factors
- ATF7_HUMAN KDM1A_HUMAN ZN189_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF7_HUMAN | -0.08 | 1.90 | 1.78 | n/a | n/a | |||
| KDM1A_HUMAN | 2.06 | -0.12 | 2.00 | n/a | n/a | |||
| ZN189_HUMAN | n/a | 2.42 | 2.00 | n/a | n/a |
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