rs576555 chr9:87974587 G>C
- Sequence
accactggggcggttcctgtaggc[G/C]acgtcaccaggagaacggaagctg
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- BMI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BMI1_HUMAN | 2.03 | -2.06 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Artery_Aorta, Brain_Substantia_nigra, Cells_Cultured_fibroblasts, Colon_Transverse, Liver, Lung, Minor_Salivary_Gland, Pancreas, Pituitary, Testis, Whole_Blood