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rs5768823 chr22:46488591 G>A

Sequence
aaaaagaacaaacgcaccccccgc[G/A]ccacagtggaaagtccccagaagc
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
RELB_HUMAN MEF2B_HUMAN IKZF1_HUMAN COT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RELB_HUMAN 2.47 -2.72 7.8·10-51.00 1.33 n/a No Hit
MEF2B_HUMAN 2.41 n/a 2.1·10-41.00 1.33 n/a No Hit
IKZF1_HUMAN 1.90 -1.69 2.7·10-41.00 1.33 n/a No Hit
COT1_HUMAN 2.15 n/a 9.9·10-41.00 1.33 n/a No Hit
IKZF2_HUMAN 1.54 -0.20 0.021.00 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi) ldl cholesterol change with statins total cholesterol years of education

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