rs577004 chr7:105743429 T>C
- Sequence
ggctgccggctggctcactgtctc[T/C]gacaagcagcaagtcttcttcagg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- REST_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REST_HUMAN | 1.36 | 0.15 | 1.42 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP hypertension (early onset hypertension), suicide attempts in bipolar disorder, suicide attempts in bipolar disorder (substance abuse/dependence), total cholesterol