rs57769476 chr1:246153928 G>A
- Sequence
ttccaacctctcataatatgtact[G/A]tgacatcattaggcactaaatcta
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- ATF2_HUMAN ATF7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | -2.28 | 2.10 | 1.33 | 1.84 | Weak Concordant | |||
| ATF7_HUMAN | -1.53 | 1.88 | 1.33 | n/a | n/a |
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Motif analysis
