rs580936 chr1:116589556 C>T
- Sequence
tcaccctcaggcaccctccacagg[C/T]gcatgcccctggtgcagtttccct
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) SK-BR-3 (breast adenocarcinoma) liver
- ASB for transcription factors
- AP2C_HUMAN P53_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| AP2C_HUMAN | 1.90 | n/a | 1.83 | n/a | No Hit | |||
| P53_HUMAN | 2.10 | -0.95 | 1.50 | n/a | No Hit |
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