rs582103 chr1:233707154 G>A
- Sequence
ctcacgatcatgagaacagcatgg[G/A]ggaaaccgcccccataatccaatc
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- KDM1A_HUMAN MTG16_HUMAN TIF1A_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM1A_HUMAN | n/a | 2.44 | 2.50 | n/a | n/a | |||
| MTG16_HUMAN | n/a | 3.48 | 4.00 | n/a | n/a | |||
| TIF1A_HUMAN | -3.17 | 2.00 | 2.75 | n/a | n/a | |||
| SMCA4_HUMAN | -2.60 | 2.11 | 2.50 | n/a | n/a | |||
| FOXK2_HUMAN | -2.60 | 1.40 | 2.11 | n/a | n/a |
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