rs582860 chr8:52941672 T>A
- Sequence
gtgatccttctttctgtctgcccc[T/A]actccttttctttgccttttccct
- ASB in cell types
- A549 (lung carcinoma) LNCaP C4-2B (prostate carcinoma) foreskin keratinocyte human cardiac myocytes
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | -0.24 | 1.33 | 1.81 | n/a | n/a | |||
| RAD21_HUMAN | 0.37 | 1.33 | 1.77 | n/a | n/a | |||
| CTCF_HUMAN | 0.49 | 0.86 | 1.49 | n/a | No Hit |
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