rs58350456 chr19:29760330 G>A
- Sequence
gcggggctgtcccgctccgagagc[G/A]gcgggaagcgccagccaggccggc
- ASB in cell types
- HEK293 (embryonic kidney) erythroid cells foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.58 | 0.97 | 1.49 | 0.80 | Weak Concordant | |||
| RAD21_HUMAN | 0.90 | -0.68 | 1.22 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
