rs584032 chr6:125843857 G>A
- Sequence
ccaaattctcacatggggcaatgt[G/A]tacattcaacaaagggctgttttg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ATF3_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | 1.48 | n/a | 2.00 | n/a | No Hit | |||
| FOXK2_HUMAN | 1.39 | -1.02 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, alcohol dependence without depressive symptoms, arthritis including non-rheumatoid, comorbid depressive syndrome and alcohol dependence, fasting insulin, height, ldl cholesterol, schizophrenia, sporadic creutzfeldt-jakob disease, total cholesterol, triglycerides
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Hippocampus, Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Brain_Substantia_nigra, Testis, Thyroid