ADASTRA v1.6.10
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rs584158
chr1:182633925
T
>
A
Sequence
gcgatggggcagatgggcattcaa[T/A]taaaaattaaaattaccaggcaaa
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
GLIS1_HUMAN
INSM2_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GLIS1_HUMAN
n/a
2.72
1.00
2.3·10
-4
2.00
n/a
n/a
INSM2_HUMAN
n/a
2.16
1.00
0.04
2.00
n/a
n/a
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5
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Motif analysis
No data available
Genetic associations
GRASP
cystatin c in serum
,
total cholesterol
GTEx eQTL
Colon_Transverse
,
Esophagus_Mucosa
,
Heart_Atrial_Appendage
,
Small_Intestine_Terminal_Ileum
,
Spleen
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)