rs584297 chr1:226520780 T>C
- Sequence
tcaaggggtcaaggcaaaggctca[T/C]agcggaggctggctcagggagatg
- ASB in cell types
- HUES64 (embryonic stem cells)
- ASB for transcription factors
- NANOG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NANOG_HUMAN | -1.94 | 2.22 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, fetal hemoglobin level (the proportion of f-cells in sickle-cell disease), height, prop taste detection threshold, triglycerides change with statins