ADASTRA v1.6.10
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rs584353
chr10:114245305
A
>
C
Sequence
gtctcatagcacggagggaagggg[A/C]ctgtgtttactgggtgccttccta
ASB in cell types
VCaP (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
FOXA1_HUMAN
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
0.67
0.04
0.03
0.91
1.90
n/a
No Hit
FOXA1_HUMAN
1.01
-0.54
0.04
0.96
2.00
n/a
No Hit
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5
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Colon_Transverse
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)