ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs584368
chr11:88232053
C
>
T
Sequence
aaccatgccatactcacttagaac[C/T]gtaatatggagcaaagccactagg
ASB in cell types
pancreas
adrenal gland
LNCaP C4-2B (prostate carcinoma)
gastroesophageal sphincter
Show more
(+11 others)
ASB for transcription factors
CTCF_HUMAN
RAD21_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
0.19
1.35
1.00
4.1·10
-50
1.46
n/a
No Hit
RAD21_HUMAN
-0.01
1.10
0.99
0.02
1.75
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
EMBL-EBI
postoperative survival time in hepatocellular carcinoma
GRASP
adiponectin levels
,
alzheimers disease
GTEx eQTL
Adipose_Subcutaneous
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)