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rs584368 chr11:88232053 C>T

Sequence
aaccatgccatactcacttagaac[C/T]gtaatatggagcaaagccactagg
ASB in cell types
pancreas adrenal gland LNCaP C4-2B (prostate carcinoma) gastroesophageal sphincter
ASB for transcription factors
CTCF_HUMAN RAD21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.19 1.35 1.004.1·10-50 1.46 n/a No Hit
RAD21_HUMAN -0.01 1.10 0.990.02 1.75 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI postoperative survival time in hepatocellular carcinoma
GRASP adiponectin levels alzheimers disease
GTEx eQTL Adipose_Subcutaneous Esophagus_Muscularis Heart_Atrial_Appendage Lung Muscle_Skeletal Nerve_Tibial

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