rs584919 chr18:42114030 T>C
- Sequence
tccaagtctggttatctgtgtttt[T/C]tcactgagaatgaagttctgtttg
- ASB in cell types
- HepG2 (hepatoblastoma) GM12878 (female B-cells)
- ASB for transcription factors
- SMAD4_HUMAN SKI_HUMAN SOX13_HUMAN BCL6_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMAD4_HUMAN | -2.99 | 2.28 | 1.50 | n/a | No Hit | |||
| SKI_HUMAN | -1.79 | 2.08 | 1.33 | n/a | n/a | |||
| SOX13_HUMAN | -2.31 | 1.88 | 1.50 | n/a | n/a | |||
| BCL6_HUMAN | -1.62 | 1.90 | 1.50 | n/a | No Hit |
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