rs586569 chr18:44901460 A>G
- Sequence
attcttaacatcatctttgcctgc[A/G]tatgagtgacttctggccaccgag
- ASB in cell types
- epithelial cell of prostate MCF10A (breast epithelial cells)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.04 | 0.28 | 1.48 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP birth weight, fasting blood glucose, obesity with early age of onset (age >2), parkinsons disease