ADASTRA v1.6.10
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rs587808
chr11:68384245
G
>
A
Sequence
gtctctgcattcctcctggcgaga[G/A]ccagagcctgggcacaggggacca
ASB in cell types
foreskin keratinocyte
epithelial cell of prostate
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte
0.81
n/a
1.1·10
-3
1.00
2.67
epithelial cell of prostate
-0.67
0.67
1.00
0.04
1.00
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
ldl cholesterol change with statins
,
renal cell carcinoma (renal cancer)
GTEx eQTL
Adrenal_Gland
,
Brain_Caudate_basal_ganglia
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Spleen
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale