rs588115 chr19:55587569 A>G
- Sequence
agtgggcgggccttgtttctcgaa[A/G]gaagatactttttttctcaaacca
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells)
- ASB for transcription factors
- FOXK2_HUMAN NRF1_HUMAN MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | -0.83 | 1.84 | 1.78 | n/a | n/a | |||
| NRF1_HUMAN | -0.28 | 1.23 | 2.05 | n/a | No Hit | |||
| MNT_HUMAN | -0.59 | 1.32 | 2.12 | n/a | n/a |
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