rs588163 chr18:3585919 T>G
- Sequence
ataagtgggggtgggaggggctag[T/G]tcacattgtttccaacgcatgact
- ASB in cell types
- CD34+ hematopoietic stem cells-derived proerythroblasts K562 (myelogenous leukemia) GM12878 (female B-cells) MM1.S (plasma cell myeloma)
- ASB for transcription factors
- CTCF_HUMAN MNT_HUMAN RAD51_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.81 | 0.60 | 1.41 | n/a | No Hit | |||
| MNT_HUMAN | 0.35 | 1.38 | 1.25 | n/a | n/a | |||
| RAD51_HUMAN | -0.39 | 1.58 | 1.17 | n/a | n/a |
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