rs588568 chr19:55587480 C>G
- Sequence
tttccagtgcgcagctccggggct[C/G]agcctgtctctaagccggtctcgg
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells)
- ASB for transcription factors
- FOXK2_HUMAN NFIB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | -0.67 | 1.73 | 1.78 | n/a | n/a | |||
| NFIB_HUMAN | -2.80 | 2.24 | 3.00 | n/a | n/a |
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