rs58958115 chr6:28863758 A>G
- Sequence
ctctaccactgagctacacccccc[A/G]acgctcaacgtgggccaaaatatt
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- ZNF24_HUMAN MAX_HUMAN MNT_HUMAN RUVB1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZNF24_HUMAN | 1.06 | -2.21 | 2.00 | n/a | n/a | |||
| MAX_HUMAN | 1.73 | -0.92 | 1.78 | n/a | No Hit | |||
| MNT_HUMAN | 2.13 | n/a | 2.00 | n/a | n/a | |||
| RUVB1_HUMAN | 2.18 | -2.02 | 2.00 | n/a | n/a | |||
| TEAD3_HUMAN | 2.27 | -3.16 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Cortex, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Testis, Thyroid, Whole_Blood