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rs590156 chr1:212483222 A>G

Sequence
catggcgtgggtgttggtgaccac[A/G]ggcccctttgttcctctctcccac
ASB in cell types
periferal blood macrophages
ASB for transcription factors
SPI1_HUMAN EGR2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 1.87 0.67 0.031.00 2.12 n/a No Hit
EGR2_HUMAN -3.00 2.29 1.000.03 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP college completion hdl cholesterol change with statins mitral annular calcium obesity with early age of onset (age >2)
GTEx eQTL Esophagus_Mucosa Skin_Sun_Exposed_Lower_leg Testis Whole_Blood

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