rs590454 chr1:20697110 T>C
- Sequence
cctccggcccacaggacagagatc[T/C]ccacagtccttctcctgtctgccc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- RAD21_HUMAN SMC3_HUMAN MEIS2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.30 | -1.25 | 1.17 | n/a | n/a | |||
| SMC3_HUMAN | -1.04 | 1.26 | 1.00 | n/a | n/a | |||
| MEIS2_HUMAN | 1.75 | -1.48 | 1.33 | n/a | No Hit |
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