rs591004 chr18:7022496 T>C
- Sequence
agctggtgccctcttgtgtcccca[T/C]gtcgtagtaccatagtatgactgg
- ASB in cell types
- foreskin keratinocyte MCF10A (breast epithelial cells) K562 (myelogenous leukemia) sigmoid colon
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.37 | 0.86 | 1.32 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP femoral neck bone mineral density (bmd), resistance to kuru in aged women despite likely exposure, schizophrenia