rs59114959 chr11:7666034 A>T
- Sequence
ttgctgggatgctgtctgggctgc[A/T]gcagctgtctgggggctcagcatg
- ASB in cell types
- A549 (lung carcinoma) KMS-11 gastroesophageal sphincter
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | -0.40 | 1.11 | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.01 | 0.86 | 1.51 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Cells_Cultured_fibroblasts, Muscle_Skeletal, Stomach, Thyroid