rs59365368 chr12:52214721 C>T
- Sequence
catggaggccacgctagccccacc[C/T]gctggctgagagagggttgcaggg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) SUM159PT (pleiomorphic breast carcinoma) SH-SY5Y (neuroblastoma) pancreas
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.35 | 2.37 | 1.53 | 3.53 | Concordant | |||
| RAD21_HUMAN | n/a | 2.46 | 1.75 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
