rs594050 chr11:106290246 C>A
- Sequence
tcatcatctgtaatttccatgtaa[C/A]cattcccctcccttcttcctgtca
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -1.59 | 1.93 | 1.50 | 4.69 | Concordant |
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Motif analysis
