rs595642 chr15:34722680 G>A
- Sequence
attcccagattgcaccctctagct[G/A]tgccagggaggagaggaaaaagaa
- ASB in cell types
- bipolar neuron liver SK-N-SH (neuroblastoma)
- ASB for transcription factors
- CTCF_HUMAN RXRA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.84 | -0.34 | 1.08 | -2.25 | Concordant | |||
| RXRA_HUMAN | -2.19 | 2.10 | 1.33 | n/a | No Hit |
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Motif analysis
