ADASTRA v1.6.10
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rs595864
chr6:13250840
T
>
C
Sequence
caggtctatcctcaagacaggtgg[T/C]gcacaaatggagtgttacacagat
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
CEBPG_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPG_HUMAN
2.22
-2.06
0.01
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
fasting insulin
,
homa-ir
,
total cholesterol
,
triglycerides
GTEx eQTL
Artery_Tibial
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Cells_Cultured_fibroblasts
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)