ADASTRA v1.6.10
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rs597672
chr11:85941570
G
>
A
Sequence
gaggtggcaggatgatgctgctca[G/A]ctcagtacccccggccactccatc
ASB in cell types
A549 (lung carcinoma)
adrenal gland
ASB for transcription factors
RAD21_HUMAN
CTCF_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN
-0.34
1.29
1.00
1.1·10
-7
1.86
n/a
n/a
CTCF_HUMAN
0.40
0.82
1.00
1.2·10
-5
1.43
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
rheumatoid arthritis
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Artery_Tibial
,
Breast_Mammary_Tissue
,
Colon_Sigmoid
,
Colon_Transverse
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)