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rs598016 chr1:54124669 G>A

Sequence
tcaaaggcagggaaactccctcgc[G/A]caggtgatgtgggcggagcctagt
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
TF65_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN -0.22 1.66 1.007.4·10-4 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Skin_Sun_Exposed_Lower_leg Testis

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