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rs598606 chr12:52534738 T>A

Sequence
aagcctcaggttccccatctgtaa[T/A]ctgaagccctggcctagtagatct
ASB in cell types
LNCaP C4-2B (prostate carcinoma) LNCaP (prostate carcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN -0.74 2.39 1.004.8·10-11 1.20 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting insulin homa-ir ldl cholesterol total cholesterol triglycerides
GTEx eQTL Adipose_Visceral_Omentum Esophagus_Mucosa Pancreas Whole_Blood

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